I know a very old Topic.
But my developed Programs are detected as Trojan/Worm.

This detect Enigma as Trojan.Agent, what a lot User have installed:
http://www.malwarebytes.org/

and Virus Total show up:

Agnitum: Suspicious!SA
eSafe: Suspicious File
Ikarus: Worm.Win32.Nuqel
McAfee-GW-Edition ...